STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SO_2691Mu phage uncharacterized protein. (196 aa)    
Predicted Functional Partners:
SO_2689
Mu phage protein of unknown function DUF1320.
  
  
 0.811
gpG-2
Mu phage tail completion protein GpG.
  
    0.799
gpL
Mu phage tail sheath protein GpL.
  
  
 0.776
gpM
Mu phage tail tube protein GpM.
  
    0.741
gp38
Mu phage uncharacterized protein Gp38.
       0.727
gp41
Mu phage uncharacterized protein Gp41.
       0.722
SO_2686
Mu phage uncharacterized protein.
  
    0.710
SO_2688
Mu phage uncharacterized protein.
  
    0.680
E18
Mu phage uncharacterized protein E18.
   
    0.608
SO_2687
Mu phage uncharacterized protein.
  
    0.607
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.