STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SO_27224-hydroxybenzoyl-CoA thioesterase family protein. (175 aa)    
Predicted Functional Partners:
SO_2721
4-hydroxybenzoyl-CoA thioesterase family protein.
     0.994
hinT
Purine nucleoside phosphoramidase HinT.
  
   0.788
SO_2930
Bifunctional pectinolytic enzyme/cytochrome c.
  
     0.547
SO_2724
Family M61 unassigned peptidase.
       0.526
SO_2720
Lipoprotein of unknown function DUF1425.
       0.507
SO_2768
acyl-CoA dehydrogenase.
 
  
 0.497
yigI
4-hydroxybenzoyl-CoA thioesterase family protein YigI.
 
  
 0.486
SO_2931
Cytochrome c lipoprotein.
  
     0.461
SO_3808
Protein of unknown function DUF2804.
  
     0.452
plsX
phosphate:acyl-ACP acyltransferase PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.427
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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