Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cctAPeriplasmic tetraheme cytochrome c CctA. (116 aa)    
Predicted Functional Partners:
nuoCD
NADH-ubiquinone oxidoreductase subunit CD NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
  
 
 0.922
SO_4506
Iron-sulfur cluster-binding protein.
  
 
 0.885
omcA
Extracelllular iron oxide respiratory system surface decaheme cytochrome c component OmcA.
   
  
 0.815
cymA
Membrane anchored tetraheme cytochrome c CymA.
   
  
 0.813
mtrA
Extracelllular iron oxide respiratory system periplasmic decaheme cytochrome c component MtrA.
   
  
 0.807
dmsE
Periplasmic decaheme cytochrome c DmsE.
      
 0.803
mtrD
Extracellular respiratory system periplasmic decaheme cytochrome c component MtrD.
      
 0.802
mtrC
Extracellular iron oxide respiratory system surface decaheme cytochrome c component MtrC.
      
 0.793
petC
Ubiquinol-cytochrome c reductase cytochrome c1 subunit PetC.
   
 
 0.754
frdB
Quinol:fumarate reductase FeS subunit FrdB.
  
 0.730
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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