Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SO_0839 | accADCB | SO_0839 | SO_0840 | Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family. | acetyl-CoA carboxylase multifunctional enzyme AccADCB. | 0.577 |
| SO_0839 | yciA | SO_0839 | SO_2772 | Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family. | acyl-CoA thioesterase YciA. | 0.412 |
| SO_2773 | fabF | SO_2773 | SO_2774 | Predicted inner membrane protein. | 3-oxoacyl-(acyl-carrier-protein) synthase II FabF; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.458 |
| SO_2773 | yciA | SO_2773 | SO_2772 | Predicted inner membrane protein. | acyl-CoA thioesterase YciA. | 0.511 |
| accADCB | SO_0839 | SO_0840 | SO_0839 | acetyl-CoA carboxylase multifunctional enzyme AccADCB. | Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family. | 0.577 |
| accADCB | fabF | SO_0840 | SO_2774 | acetyl-CoA carboxylase multifunctional enzyme AccADCB. | 3-oxoacyl-(acyl-carrier-protein) synthase II FabF; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.988 |
| accADCB | fadJ | SO_0840 | SO_3088 | acetyl-CoA carboxylase multifunctional enzyme AccADCB. | Anaerobic fatty oxidation complex alpha subunit FadJ; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.803 |
| accADCB | yciA | SO_0840 | SO_2772 | acetyl-CoA carboxylase multifunctional enzyme AccADCB. | acyl-CoA thioesterase YciA. | 0.688 |
| fabF | SO_2773 | SO_2774 | SO_2773 | 3-oxoacyl-(acyl-carrier-protein) synthase II FabF; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Predicted inner membrane protein. | 0.458 |
| fabF | accADCB | SO_2774 | SO_0840 | 3-oxoacyl-(acyl-carrier-protein) synthase II FabF; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | acetyl-CoA carboxylase multifunctional enzyme AccADCB. | 0.988 |
| fabF | yciA | SO_2774 | SO_2772 | 3-oxoacyl-(acyl-carrier-protein) synthase II FabF; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | acyl-CoA thioesterase YciA. | 0.422 |
| fadJ | accADCB | SO_3088 | SO_0840 | Anaerobic fatty oxidation complex alpha subunit FadJ; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | acetyl-CoA carboxylase multifunctional enzyme AccADCB. | 0.803 |
| fadJ | garR | SO_3088 | SO_2771 | Anaerobic fatty oxidation complex alpha subunit FadJ; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 2-hydroxy-3-oxopropionate reductase GarR. | 0.474 |
| fadJ | yciA | SO_3088 | SO_2772 | Anaerobic fatty oxidation complex alpha subunit FadJ; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | acyl-CoA thioesterase YciA. | 0.406 |
| garR | fadJ | SO_2771 | SO_3088 | 2-hydroxy-3-oxopropionate reductase GarR. | Anaerobic fatty oxidation complex alpha subunit FadJ; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. | 0.474 |
| garR | yciA | SO_2771 | SO_2772 | 2-hydroxy-3-oxopropionate reductase GarR. | acyl-CoA thioesterase YciA. | 0.423 |
| yciA | SO_0839 | SO_2772 | SO_0839 | acyl-CoA thioesterase YciA. | Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family. | 0.412 |
| yciA | SO_2773 | SO_2772 | SO_2773 | acyl-CoA thioesterase YciA. | Predicted inner membrane protein. | 0.511 |
| yciA | accADCB | SO_2772 | SO_0840 | acyl-CoA thioesterase YciA. | acetyl-CoA carboxylase multifunctional enzyme AccADCB. | 0.688 |
| yciA | fabF | SO_2772 | SO_2774 | acyl-CoA thioesterase YciA. | 3-oxoacyl-(acyl-carrier-protein) synthase II FabF; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.422 |
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