Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SO_2803 | fbpC | SO_2803 | SO_0742 | DNA internalization-related competance protein ComEC/Rec2 family. | ABC-type Fe3+ uptake system ATPase component FbpC; Belongs to the ABC transporter superfamily. | 0.466 |
| SO_2803 | lpxK | SO_2803 | SO_2801 | DNA internalization-related competance protein ComEC/Rec2 family. | Tetraacyldisaccharide 4'-kinase LpxK; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.762 |
| SO_2803 | msbA | SO_2803 | SO_2802 | DNA internalization-related competance protein ComEC/Rec2 family. | ABC-type lipid A export system bifunctional ATPase and permease components MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.736 |
| SO_2803 | potG | SO_2803 | SO_1271 | DNA internalization-related competance protein ComEC/Rec2 family. | ABC-type putrescine uptake system ATPase component PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.466 |
| SO_2803 | ycaR | SO_2803 | SO_2800 | DNA internalization-related competance protein ComEC/Rec2 family. | UPF0434 family protein of unknown function YcaR; Belongs to the UPF0434 family. | 0.762 |
| SO_3885 | msbA | SO_3885 | SO_2802 | AAA ATPase family protein; Belongs to the AAA ATPase family. | ABC-type lipid A export system bifunctional ATPase and permease components MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.648 |
| SO_4147 | msbA | SO_4147 | SO_2802 | Type I secretion system ATPase and inner membrane subunit HlyB family. | ABC-type lipid A export system bifunctional ATPase and permease components MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.595 |
| btuD | msbA | SO_1033 | SO_2802 | ABC-type cobalamin uptake system ATPase component BtuD. | ABC-type lipid A export system bifunctional ATPase and permease components MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.909 |
| dnaK | msbA | SO_1126 | SO_2802 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | ABC-type lipid A export system bifunctional ATPase and permease components MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.621 |
| fbpC | SO_2803 | SO_0742 | SO_2803 | ABC-type Fe3+ uptake system ATPase component FbpC; Belongs to the ABC transporter superfamily. | DNA internalization-related competance protein ComEC/Rec2 family. | 0.466 |
| fbpC | msbA | SO_0742 | SO_2802 | ABC-type Fe3+ uptake system ATPase component FbpC; Belongs to the ABC transporter superfamily. | ABC-type lipid A export system bifunctional ATPase and permease components MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.769 |
| fbpC | potG | SO_0742 | SO_1271 | ABC-type Fe3+ uptake system ATPase component FbpC; Belongs to the ABC transporter superfamily. | ABC-type putrescine uptake system ATPase component PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.449 |
| lpxK | SO_2803 | SO_2801 | SO_2803 | Tetraacyldisaccharide 4'-kinase LpxK; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | DNA internalization-related competance protein ComEC/Rec2 family. | 0.762 |
| lpxK | msbA | SO_2801 | SO_2802 | Tetraacyldisaccharide 4'-kinase LpxK; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | ABC-type lipid A export system bifunctional ATPase and permease components MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.992 |
| lpxK | ycaR | SO_2801 | SO_2800 | Tetraacyldisaccharide 4'-kinase LpxK; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | UPF0434 family protein of unknown function YcaR; Belongs to the UPF0434 family. | 0.826 |
| msbA | SO_2803 | SO_2802 | SO_2803 | ABC-type lipid A export system bifunctional ATPase and permease components MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | DNA internalization-related competance protein ComEC/Rec2 family. | 0.736 |
| msbA | SO_3885 | SO_2802 | SO_3885 | ABC-type lipid A export system bifunctional ATPase and permease components MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | AAA ATPase family protein; Belongs to the AAA ATPase family. | 0.648 |
| msbA | SO_4147 | SO_2802 | SO_4147 | ABC-type lipid A export system bifunctional ATPase and permease components MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | Type I secretion system ATPase and inner membrane subunit HlyB family. | 0.595 |
| msbA | btuD | SO_2802 | SO_1033 | ABC-type lipid A export system bifunctional ATPase and permease components MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | ABC-type cobalamin uptake system ATPase component BtuD. | 0.909 |
| msbA | dnaK | SO_2802 | SO_1126 | ABC-type lipid A export system bifunctional ATPase and permease components MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.621 |
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