Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nnrSHeme-copper-containing inner membrane protein NnrS. (390 aa)    
Predicted Functional Partners:
nsrR
Nitrite-sensitive transcriptional repressor NsrR.
  
  
 0.950
dnrN
Repair of iron centers (RIC) protein DnrN; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
 
  
 0.908
narQ
Nitrate/nitrite-responsive two component signal transduction system histidine kinase NarQ.
 
   
 0.777
iscR
Transcriptional repressor of iron-sulfur cluster assembly genes IscR; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins.
  
  
 0.768
SO_1248
Peptidase U32 family YhbV.
 
    0.740
hcr
NADH oxidoreductase Hcr.
  
  
 0.740
nosY
ABC-type copper transport system permease component NosY.
 
    0.703
nosD
ABC-type copper transport system substrate-binding component NosD.
 
    0.684
nosL
ABC-type copper uptake system periplasmic chaperone component NosL.
 
     0.671
narP
Nitrate/nitrite-responsive two component signal transduction system response regulator NarP.
      
 0.668
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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