STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SO_2806Phospahte starvation inducible E-like protein; Belongs to the PsiE family. (134 aa)    
Predicted Functional Partners:
SO_0404
Zinc dependent metalloprotease domain lipoprotein.
  
     0.533
SO_2807
c-di-GMP-binding protein.
       0.476
nnrS
Heme-copper-containing inner membrane protein NnrS.
       0.473
SO_4379
Fatty acid biosynthesis locus lipoprotein of unknown function DUF3261.
   
    0.443
SO_0564
Zinc-regulated TonB-dependent zinc receptor.
  
     0.441
SO_3124
Dual specificity protein-tyrosine phosphatase.
  
     0.428
SO_0497
Serine/threonine protein kinase.
  
     0.417
SO_3273
Motility accessory factor Maf family.
  
    0.402
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.