Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SO_1418 | SO_1821 | SO_1418 | SO_1821 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Outer membrane porin. | 0.497 |
| SO_1418 | SO_3099 | SO_1418 | SO_3099 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Outer membrane long-chain fatty acid receptor FadL family. | 0.470 |
| SO_1418 | SO_3705 | SO_1418 | SO_3705 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase. | 0.509 |
| SO_1418 | SO_4014 | SO_1418 | SO_4014 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | HAE1 family effllux pump permease component; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.508 |
| SO_1418 | SO_4681 | SO_1418 | SO_4681 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Glycosyl transferase family 4. | 0.601 |
| SO_1418 | argO | SO_1418 | SO_2865 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | L-arginine efflux tranporter ArgO. | 0.508 |
| SO_1418 | nupX | SO_1418 | SO_3706 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Nucleoside:proton symporter NupX; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family. | 0.508 |
| SO_1418 | sdaC | SO_1418 | SO_0919 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Serine uptake transporter SdaC. | 0.457 |
| SO_1418 | yiaD | SO_1418 | SO_3969 | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | Putative outer membrane lipoprotein YiaD. | 0.561 |
| SO_1821 | SO_1418 | SO_1821 | SO_1418 | Outer membrane porin. | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.497 |
| SO_1821 | SO_3099 | SO_1821 | SO_3099 | Outer membrane porin. | Outer membrane long-chain fatty acid receptor FadL family. | 0.809 |
| SO_1821 | SO_3705 | SO_1821 | SO_3705 | Outer membrane porin. | 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase. | 0.501 |
| SO_1821 | SO_4014 | SO_1821 | SO_4014 | Outer membrane porin. | HAE1 family effllux pump permease component; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. | 0.518 |
| SO_1821 | SO_4681 | SO_1821 | SO_4681 | Outer membrane porin. | Glycosyl transferase family 4. | 0.530 |
| SO_1821 | argO | SO_1821 | SO_2865 | Outer membrane porin. | L-arginine efflux tranporter ArgO. | 0.510 |
| SO_1821 | nupX | SO_1821 | SO_3706 | Outer membrane porin. | Nucleoside:proton symporter NupX; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family. | 0.524 |
| SO_1821 | sdaC | SO_1821 | SO_0919 | Outer membrane porin. | Serine uptake transporter SdaC. | 0.577 |
| SO_1821 | yiaD | SO_1821 | SO_3969 | Outer membrane porin. | Putative outer membrane lipoprotein YiaD. | 0.587 |
| SO_3099 | SO_1418 | SO_3099 | SO_1418 | Outer membrane long-chain fatty acid receptor FadL family. | ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family. | 0.470 |
| SO_3099 | SO_1821 | SO_3099 | SO_1821 | Outer membrane long-chain fatty acid receptor FadL family. | Outer membrane porin. | 0.809 |
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