Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SO_2868 | yfgC | SO_2868 | SO_2869 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Periplasmic Zn-dependent protease YfgC; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.569 |
| SO_2868 | yfgO | SO_2868 | SO_2867 | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | Predicted inner membrane permease UPF0118 family YfgO. | 0.534 |
| SO_2878 | yfgO | SO_2878 | SO_2867 | Putative periplasmic protein of unknown function DUF2066. | Predicted inner membrane permease UPF0118 family YfgO. | 0.470 |
| recF | yfgO | SO_0010 | SO_2867 | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. | Predicted inner membrane permease UPF0118 family YfgO. | 0.407 |
| sirB | yfgO | SO_0480 | SO_2867 | Sulfurtransferase SirB. | Predicted inner membrane permease UPF0118 family YfgO. | 0.410 |
| yfgC | SO_2868 | SO_2869 | SO_2868 | Periplasmic Zn-dependent protease YfgC; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | 0.569 |
| yfgC | yfgO | SO_2869 | SO_2867 | Periplasmic Zn-dependent protease YfgC; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Predicted inner membrane permease UPF0118 family YfgO. | 0.413 |
| yfgO | SO_2868 | SO_2867 | SO_2868 | Predicted inner membrane permease UPF0118 family YfgO. | SirA-like protein; Belongs to the sulfur carrier protein TusA family. | 0.534 |
| yfgO | SO_2878 | SO_2867 | SO_2878 | Predicted inner membrane permease UPF0118 family YfgO. | Putative periplasmic protein of unknown function DUF2066. | 0.470 |
| yfgO | recF | SO_2867 | SO_0010 | Predicted inner membrane permease UPF0118 family YfgO. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. | 0.407 |
| yfgO | sirB | SO_2867 | SO_0480 | Predicted inner membrane permease UPF0118 family YfgO. | Sulfurtransferase SirB. | 0.410 |
| yfgO | yfgC | SO_2867 | SO_2869 | Predicted inner membrane permease UPF0118 family YfgO. | Periplasmic Zn-dependent protease YfgC; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.413 |