STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SO_2872Membrane protein of unknown function DUF2069. (124 aa)    
Predicted Functional Partners:
SO_3722
Protein of unknown function DUF2806.
  
    0.757
gspN
T2aSS secretion system protein GspN.
  
    0.751
SO_2914
Protein of unknown function DUF412.
  
    0.744
motX
Flagellar rotation associated protein MotX.
  
     0.739
flgO
Outer membrane lipoprotein required for flagellar motility FlgO.
  
     0.734
SO_2254
Periplasmic protein of unknown function DUF2803.
  
     0.731
SO_1618
Protein of unknown function DUF3549.
  
    0.729
gspL
T2aSSsecretion system inner membrane platform protein GspL; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
  
     0.719
SO_4182
ATP-dependent protease La (LON) domain protein.
  
     0.711
SO_4729
Protein of unknown function DUF2489.
  
    0.695
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.