rluB protein (Shewanella oneidensis) - STRING interaction network

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Score

rluB

23S rRNA pseudouridine2605 synthase RluB; Belongs to the pseudouridine synthase RsuA family. (291 aa)

Predicted Functional Partners:

dnaG

0.934

cmk

0.878

der

0.841

yciO

0.745

trpH

0.701

scpB

0.617

xth

0.609

flgD

0.587

flgG

0.578

pilX

0.567

Your Current Organism:

Shewanella oneidensis

NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cmk	der	SO_2403	SO_3308	Cytidylate kinase Cmk.	50S ribosome assembly GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.983
cmk	rluB	SO_2403	SO_2937	Cytidylate kinase Cmk.	23S rRNA pseudouridine2605 synthase RluB; Belongs to the pseudouridine synthase RsuA family.	0.878
cmk	scpB	SO_2403	SO_3014	Cytidylate kinase Cmk.	Segregation and condensation protein ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	0.754
der	cmk	SO_3308	SO_2403	50S ribosome assembly GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Cytidylate kinase Cmk.	0.983
der	dnaG	SO_3308	SO_1286	50S ribosome assembly GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	0.970
der	rluB	SO_3308	SO_2937	50S ribosome assembly GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	23S rRNA pseudouridine2605 synthase RluB; Belongs to the pseudouridine synthase RsuA family.	0.841
der	scpB	SO_3308	SO_3014	50S ribosome assembly GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	Segregation and condensation protein ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.	0.559
dnaG	der	SO_1286	SO_3308	DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	50S ribosome assembly GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.	0.970
dnaG	flgD	SO_1286	SO_3248	DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	Flagellar hook assembly protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.	0.415
dnaG	flgG	SO_1286	SO_3244	DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	Flagellar component of cell-distal portion of basal-body rod FlgG; Belongs to the flagella basal body rod proteins family.	0.424
dnaG	rluB	SO_1286	SO_2937	DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	23S rRNA pseudouridine2605 synthase RluB; Belongs to the pseudouridine synthase RsuA family.	0.934
flgD	dnaG	SO_3248	SO_1286	Flagellar hook assembly protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.	DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	0.415
flgD	flgG	SO_3248	SO_3244	Flagellar hook assembly protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.	Flagellar component of cell-distal portion of basal-body rod FlgG; Belongs to the flagella basal body rod proteins family.	0.999
flgD	pilX	SO_3248	SO_3526	Flagellar hook assembly protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.	Type IV minor pilin protein PilX.	0.569
flgD	rluB	SO_3248	SO_2937	Flagellar hook assembly protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.	23S rRNA pseudouridine2605 synthase RluB; Belongs to the pseudouridine synthase RsuA family.	0.587
flgG	dnaG	SO_3244	SO_1286	Flagellar component of cell-distal portion of basal-body rod FlgG; Belongs to the flagella basal body rod proteins family.	DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	0.424
flgG	flgD	SO_3244	SO_3248	Flagellar component of cell-distal portion of basal-body rod FlgG; Belongs to the flagella basal body rod proteins family.	Flagellar hook assembly protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.	0.999
flgG	pilX	SO_3244	SO_3526	Flagellar component of cell-distal portion of basal-body rod FlgG; Belongs to the flagella basal body rod proteins family.	Type IV minor pilin protein PilX.	0.485
flgG	rluB	SO_3244	SO_2937	Flagellar component of cell-distal portion of basal-body rod FlgG; Belongs to the flagella basal body rod proteins family.	23S rRNA pseudouridine2605 synthase RluB; Belongs to the pseudouridine synthase RsuA family.	0.578
pilX	flgD	SO_3526	SO_3248	Type IV minor pilin protein PilX.	Flagellar hook assembly protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.	0.569

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