STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cIILambda phage phage regulatory protein CII. (169 aa)    
Predicted Functional Partners:
SO_2987
Lambda phage uncharacterized protein.
  
    0.820
SO_2986
Lambda phage uncharacterized protein.
  
    0.806
SO_3984
Metal ion transporter MIT family.
   
  
 0.787
cro
Lambda phage transcriptional repressor of early genes Cro.
  
    0.721
SO_2982
Lambda phage uncharacterized protein.
  
    0.632
P
Lambda phage replication protein P.
  
    0.623
phoQ
Two component signal transduction system histidine kinase PhoQ.
      
 0.620
SO_2978
Lambda phage integrase; Belongs to the 'phage' integrase family.
  
    0.617
SO_2981
Lambda phage uncharacterized protein.
  
    0.617
SO_2983
Lambda phage uncharacterized protein.
  
    0.615
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.