STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SO_2995Lambda phage uncharacterized protein. (25 aa)    
Predicted Functional Partners:
SO_2997
Lambda phage uncharacterized protein.
  
    0.761
SO_2998
Lambda phage uncharacterized protein.
  
    0.756
SO_3005
Lambda phage uncharacterized protein.
  
    0.625
SO_3000
Lambda phage uncharacterized protein.
  
    0.620
SO_3001
Lambda phage uncharacterized protein.
  
    0.543
dcm
Lambda phage type II restriction modification system cytosine-5 DNA methyltransferase Dcm.
  
    0.483
SO_3003
Lambda phage uncharacterized protein.
  
    0.466
SO_3007
Lambda phage uncharacterized protein.
  
    0.450
SO_3002
Lambda phage uncharacterized protein.
  
    0.449
SO_2999
Lambda phage protein of unknown function DUF1317.
  
    0.448
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.