Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ispZIntracellular septation protein IspZ; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. (181 aa)    
Predicted Functional Partners:
yciL
Protein of unknown function YciL.
  
    0.837
cmoA
tRNA (uridine-5-oxyacetic acid methyl ester) 34 synthase CmoA; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).
   
    0.785
xth
Exodeoxyribonuclease III Xth.
  
    0.779
SO_4560
Predicted membrane protein.
  
    0.638
ptsG
Phosphotransferase system (PTS) glucose-specific IIBC component PtsG.
      
 0.546
ftsH
ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
      
 0.492
putB
Ferric putrebactin reductase PutB.
       0.471
SO_4340
Putative transport protein with Tim44-like domain.
  
    0.422
ycaR
UPF0434 family protein of unknown function YcaR; Belongs to the UPF0434 family.
  
     0.400
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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