STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SO_3047Protein of unknown function DUF1097. (163 aa)    
Predicted Functional Partners:
yecM
Protein of unknown function YecM.
  
     0.751
tyrP
Tyrosine transporter TyrP.
  
     0.685
mtr
High affinity tryptophan transporter Mtr.
  
     0.606
SO_1074
Tyrosine transporter TyrP-like protein.
  
     0.605
yedE
Membrane protein of unknown function DUF395 YedE.
  
     0.595
ychN
Protein YchN.
  
     0.586
yedF
SirA family protein YedF; Belongs to the sulfur carrier protein TusA family.
  
     0.562
nhaB
Sodium:proton antiporter NhaB; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaB Na(+)/H(+) (TC 2.A.34) antiporter family.
  
    0.558
SO_1764
Protein of unknown function DUF1706.
  
     0.556
SO_3647
Membrane protein of unknown function COG3610.
  
     0.525
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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