Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
agaOSugar oxidoreductase AgaO; Glycosidase that has specific alpha-N-acetylgalactosaminidase activity; Belongs to the Gfo/Idh/MocA family. Glycosyl hydrolase 109 subfamily. (459 aa)    
Predicted Functional Partners:
galK
Galactokinase GalK; Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.842
lysS
lysyl-tRNA synthetase LysS; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.820
SO_0363
Nucleoside-diphosphate-sugar pyrophosphorylase.
 
   
 0.774
SO_0364
Phosphotransferase enzyme family protein.
 
     0.757
cobB
Deacetylase of acetyl-CoA synthetase NAD-dependent CobB; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form.
    
 
 0.683
nagX
N-acetylglucosamine locus membrane protein of unknown function DUF1624 NagX.
  
     0.657
sorB
Sulfite dehydrogenase cytochrome c subunit SorB.
  
     0.605
wbpA
UDP-N-acetyl-d-glucosamine 6-dehydrogenase WbpA; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.602
sorA
Sulfite dehydrogenase molybdopterin-binding subunit SorA.
 
     0.570
SO_4002
Two component signal transduction system hybrid histidine kinase/response regulator with PAS sensory domain.
  
 
 0.549
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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