Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
wbpAUDP-N-acetyl-d-glucosamine 6-dehydrogenase WbpA; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (426 aa)    
Predicted Functional Partners:
wbpP
UDP-GlkcNAc C4 epimerase WbpP.
 
 0.998
wbfY
Polysaccharide biosynthesis protein epimerase/dehydratase-like WbfY.
  
 
 0.937
pseB
Bifunctional UDP GlcNAc C6 dehydratase/C5 epimerase PseB.
  
 
 0.934
glmU
Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family.
  
 
 0.931
wzz
Polysaccharide chain length determinant Wzz.
  
  
 0.925
rfbB
dTDP-glucose-4,6-dehydratase RfbB.
  
  
 0.880
SO_3183
Perosamine synthetase-related protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.876
SO_3174
O-antigen biosynthesis glycosyl transferase family 4.
  
 0.837
wbnI
Glycosyl transferase family 2 WbnI.
  
  
 0.817
potH
ABC-type putrescine uptake system permease component 1 PotH.
      
 0.782
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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