STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SO_3204ParA family protein. (263 aa)    
Predicted Functional Partners:
parB
Chromosome partitioning protein ParB; Belongs to the ParB family.
 
 0.970
cheW-4
Chemotaxis signal transduction system adaptor protein CheW.
 
 
 0.953
cheW-3
Chemotaxis signal transduction system adaptor protein CheW.
 
   0.843
SO_0910
Protein of unknown function DUF1568.
      
 0.782
cheZ
Chemotaxis signal transduction system CheY phosphatase CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
 
    0.759
SO_3200
Putative membrane anchored protein of unknown function DUF2802.
 
  
 0.751
fliL
Flagellar basal body protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
    0.695
flhG
Flagellar polar localization control system FlhF inhibitory ATPase FlhG.
 
  
 0.685
cheY-4
Chemotaxis signal transduction system response regulator CheY.
 
 
 0.672
SO_3718
Thiol:disulfide interchange protein DsbA family.
   
  
 0.672
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.