STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flrCTwo-component system, response regulator FlrC; Two component signal transduction system controlling flagella biosynthesis Sigma54-dependent response regulator FlrC. (446 aa)    
Predicted Functional Partners:
flrB
Two-component system, sensor histidine kinase FlrB; Two component signal transduction system controlling flagellar biosynthesis histidine kinase with PAS sensory domain FlrB.
 0.999
fliE
Flagellar basal-body component FliE.
 
  
 0.896
flgK
Flagellar hook-filament junction protein FlgK; Belongs to the flagella basal body rod proteins family.
  
  
 0.862
fliF
Flagellar basal-body MS-ring and collar protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.837
motY
Smf-dependent flagellar motor protein MotY.
 
  
 0.829
fliK
Flagellar hook-length control protein FliK.
  
  
 0.827
fliG
Flagellar motor switching and energizing component FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
  
 0.796
rpoN
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
   
 0.791
flhF
Flagellar polar localization control system flagellar assembly determinant GTPase FlhF.
 
  
 0.780
fliH
Flagellar assembly protein FliH.
 
  
 0.774
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.