STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flrASigma54-dependent transcriptional regulator for flagellar biosynthesis FlrA. (477 aa)    
Predicted Functional Partners:
flhG
Flagellar polar localization control system FlhF inhibitory ATPase FlhG.
 
 
 0.918
fliS
Chaperone for FliC flagellin FliS.
 
  
 0.891
flrB
Two-component system, sensor histidine kinase FlrB; Two component signal transduction system controlling flagellar biosynthesis histidine kinase with PAS sensory domain FlrB.
 
 0.858
rpoN
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.847
flhF
Flagellar polar localization control system flagellar assembly determinant GTPase FlhF.
  
  
 0.787
fliD
Flagellar filament capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.723
fliC
Flagellin FliC; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
  
 0.719
flhA
Flagellar export protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
  
  
 0.703
fliF
Flagellar basal-body MS-ring and collar protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.701
fliC-2
Flagellin FliC; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
  
 0.698
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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