Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
flrASigma54-dependent transcriptional regulator for flagellar biosynthesis FlrA. (477 aa)    
Predicted Functional Partners:
flhG
Flagellar polar localization control system FlhF inhibitory ATPase FlhG.
 
 
 0.968
rpoN
RNA polymerase sigma-54 factor RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.931
flrB
Two-component system, sensor histidine kinase FlrB; Two component signal transduction system controlling flagellar biosynthesis histidine kinase with PAS sensory domain FlrB.
 
 
 0.877
fliS
Chaperone for FliC flagellin FliS.
 
  
 0.825
flhF
Flagellar polar localization control system flagellar assembly determinant GTPase FlhF.
  
  
 0.814
fliA
RNA polymerase sigma-28 factor for flagellar operon FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.
  
  
 0.750
flrC
Two-component system, response regulator FlrC; Two component signal transduction system controlling flagella biosynthesis Sigma54-dependent response regulator FlrC.
 
   
0.726
bpfA
Biofilm-promoting protein BpfA.
   
 
 0.712
SO_4407
Diguanylate cyclase.
      
 0.661
fliD
Flagellar filament capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.653
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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