STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
fliDFlagellar filament capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. (456 aa)    
Predicted Functional Partners:
fliS
Chaperone for FliC flagellin FliS.
 
 
 0.998
fliC
Flagellin FliC; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.994
flgL
Flagellar hook-associated protein FlgL.
 
 
 0.994
fliI
Flagellar protein export ATPase FliI.
 
  
 0.992
fliH
Flagellar assembly protein FliH.
 
  
 0.992
fliC-2
Flagellin FliC; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.992
flgK
Flagellar hook-filament junction protein FlgK; Belongs to the flagella basal body rod proteins family.
 
  
 0.992
flaG
Uncharacterized flagella locus protein FlaG.
 
  
 0.990
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.985
fliN
Flagellar motor switching and energizing component FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
  
 0.984
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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