Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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relAGTP pyrophosphokinase RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (735 aa)    
Predicted Functional Partners:
SO_3442
Nucleoside triphosphate pyrophosphohydrolase.
 
 
 0.949
gppA
Guanosine pentaphosphate phosphatase GppA.
 
 
 0.927
spoT
Bifunctional ppGpp phosphohydrolase/GTP diphosphokinase SpoT; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
  
 
0.916
ndk
Nucleoside diphosphate kinase Ndk; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
 0.914
ppx
Exopolyphosphatase Ppx; Belongs to the GppA/Ppx family.
  
 
 0.913
cyaA
Adenylate cyclase CyaA; Belongs to the adenylyl cyclase class-1 family.
     
 0.902
cyaC
Adenylate cyclase CyaC.
   
 
  0.900
nrdD
Anaerobic ribonucleoside-triphosphate reductase NrdD.
     
 0.900
cyaB
Cytoplasmic adenylate cyclase CyaB.
     
  0.900
rpsF
30S ribosomal protein S6 RpsF; Binds together with S18 to 16S ribosomal RNA.
  
 
 
 0.869
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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