Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nagPN-acetyl glucosamine transporter NagP. (435 aa)    
Predicted Functional Partners:
nagR
Transcriptional repressor of N-acetylglucosamine utilization NagR.
 
   
 0.898
SO_3514
TonB-dependent chitooligosaccharide receptor.
 
  
 0.892
hexB
beta-N-acetylhexosaminidase HexB.
 
    0.727
nagA
N-acetylglucosamine-6-phosphate deacetylase NagA; Belongs to the metallo-dependent hydrolases superfamily. NagA family.
 
  
 0.686
nagK
N-acetylglucosamine kinase NagK.
 
    0.676
pilY
Type IV pili system adhesin PilY.
      
 0.664
SO_0854
PilD processed protein.
   
  
 0.662
nagX
N-acetylglucosamine locus membrane protein of unknown function DUF1624 NagX.
 
    0.623
malR
Transcriptional repressor of maltodextrose utilization MalR.
 
     0.594
malT
Putative maltose transporter MalT.
 
  
 0.570
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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