STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nagXN-acetylglucosamine locus membrane protein of unknown function DUF1624 NagX. (395 aa)    
Predicted Functional Partners:
nagA
N-acetylglucosamine-6-phosphate deacetylase NagA; Belongs to the metallo-dependent hydrolases superfamily. NagA family.
 
    0.670
agaO
Sugar oxidoreductase AgaO; Glycosidase that has specific alpha-N-acetylgalactosaminidase activity; Belongs to the Gfo/Idh/MocA family. Glycosyl hydrolase 109 subfamily.
  
     0.657
hexB
beta-N-acetylhexosaminidase HexB.
 
     0.623
nagP
N-acetyl glucosamine transporter NagP.
 
    0.602
nagK
N-acetylglucosamine kinase NagK.
 
    0.546
nagB
Glucosamine-6-phosphate deaminase NagB.
  
    0.521
galM
Aldose 1-epimerase GalM; Converts alpha-aldose to the beta-anomer.
  
     0.459
SO_1539
Periplasmic peptidase family S9.
  
     0.454
SO_1510
Protein of unknown function DUF1568.
   
    0.443
rimJ
Ribosomal protein S5 p-alanine acetyltransferase RimJ.
   
    0.418
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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