STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nagRTranscriptional repressor of N-acetylglucosamine utilization NagR. (338 aa)    
Predicted Functional Partners:
gltB
NADPH-dependent glutamate synthase large subunit GltB.
    
 
 0.933
nagP
N-acetyl glucosamine transporter NagP.
 
  
 0.887
SO_3514
TonB-dependent chitooligosaccharide receptor.
 
  
 0.833
ptsH
Phosphotransferase system (PTS) phosphocarrier protein HPr PtsH.
   
 
 0.734
ptsO
Phosphotransferase system (PTS) phosphohisitinoprotein-hexose phosphotransferase comonent PtsO.
   
 
 0.734
malT
Putative maltose transporter MalT.
 
   
 0.718
SO_4612
Uncharacterized protein.
   
    0.701
SO_3513
Flavin-dependent tryptophan halogenase.
  
     0.676
susB
Alpha-glucosidase SusB.
  
     0.654
guaA
GMP synthase (glutamine-hydrolysing) GuaA; Catalyzes the synthesis of GMP from XMP.
    
   0.615
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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