STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azrNADPH-dependent azoreductase Azr. (204 aa)    
Predicted Functional Partners:
SO_3586
Glyoxalase family protein.
 
  
 0.938
SO_3587
Uncharacterized protein.
  
  
 0.865
azrR
Superoxide-responsive transcriptional repressor of superoxide stress response AzrR.
  
  
 0.784
SO_2426
Two component signal transduction system response regulator.
   
  
 0.721
cysD
Sulfate adenylyltransferase small subunit CysD.
   
  
 0.592
SO_1756
Glyoxalase family protein.
     
 0.569
deoR
Nucleoside-responsive transcriptional activator of nucleoside utilization DeoR.
   
  
 0.560
SO_3583
16S rRNA pseudouridine synthase RsuA family; Belongs to the pseudouridine synthase RsuA family.
  
    0.519
cysH
Phosphoadenylyl-sulfate reductase thioredoxin-dependent CysH; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
   
  
 0.510
SO_0404
Zinc dependent metalloprotease domain lipoprotein.
      
 0.509
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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