Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SO_3659Thiol:disulfide interchange protein. (181 aa)    
Predicted Functional Partners:
selR
methionine-R-sulfoxide reductase SelR; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.932
dsbC
Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
  
 
 0.840
ccmG
Cytochrome c maturation system membrane anchored thioredoxin CcmG.
  
 
 0.835
torA
trimethylamine-N-oxide reductase TorA; Reduces trimethylamine-N-oxide (TMAO) into trimethylamine; an anaerobic reaction coupled to energy-yielding reactions.
   
  
 0.788
nosF
ABC-type copper transport system ATPase component NosF.
  
    0.785
SO_2460
Uncharacterized protein.
      
 0.662
SO_2100
Thioredoxin family protein.
  
 
 0.656
dsbA
Periplasmic thiol:disulfide interchange protein DsbA.
  
 
 0.576
SO_0269
Cytochrome c-type biogenesis thioredoxin.
  
 
 0.575
sirH
Cytochrome c maturation system periplasmic thioredoxin SirH.
  
 
 0.575
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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