Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
csgGCurli secretion apparatus outer membrane lipoprotein component CsgG. (268 aa)    
Predicted Functional Partners:
csgF
Curli secretion apparatus component CsgF.
 
 
 0.999
csgE
Curli secretion apparatus substrate specificity factor CsgE.
  
 
 0.999
csgA
Major curlin subunit CsgA.
 
  
 0.991
csgB
Minor curlin subunit CsgB.
 
  
 0.966
csgD
Transcriptional activator of curli operon CsgD.
 
  
 0.957
SO_2725
Transcriptional regulator LuxR family.
  
  
 0.763
SO_0867
Collagenolytic serine protease; Belongs to the peptidase S8 family.
 
    0.613
mdoG
Periplasmic glucan biosynthesis protein MdoG; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
  
   
 0.512
gmhB
DD-heptose 17-bisphosphate phosphatase GmhB.
      
 0.470
folX
D-erythro-78-dihydroneopterin triphosphate epimerase FolX.
 
     0.469
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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