STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Coexpression
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[Homology]
Score
nfnBBifunctional oxygen-insensitive NAD(P)H nitroreductase/dihydropteridine reductase NfnB. (217 aa)    
Predicted Functional Partners:
folX
D-erythro-78-dihydroneopterin triphosphate epimerase FolX.
     
 0.804
SO_0587
Glycerophosphodiester phosphodiesterase.
   
  
 0.803
wzx
O-antigen flippase Wzx.
 
   
 0.794
cobS
Cobalamin 5-phosphate synthase CobS; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
  
  
 0.722
ycaO
Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO.
  
  
 0.714
folM
Dihydrofolate reductase FolM.
   
 
 0.691
rfbc
dTDP-4-keto-L-rhamnose-35-epimerase RfbC; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
     
 0.680
sye2
NAD(P)H:flavin oxidoreductase Sye2.
  
 
 0.669
sye1
NADH:flavin oxidoreductase Sye1.
  
 
 0.668
sye4
NAD(P)H:flavin oxidoreductase Sye4.
  
 
 0.668
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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