STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SO_3722Protein of unknown function DUF2806. (279 aa)    
Predicted Functional Partners:
flgO
Outer membrane lipoprotein required for flagellar motility FlgO.
  
     0.773
motX
Flagellar rotation associated protein MotX.
  
     0.767
SO_2557
TIGR03503 family protein.
  
    0.758
SO_2872
Membrane protein of unknown function DUF2069.
  
    0.757
flgP
Outer membrane lipoprotein required for flagellar motility FlgP.
  
     0.711
flgT
Flagella assembly protein FlgT.
  
     0.706
SO_0132
Periplasmic FliL-like protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.705
mshI2
MSHA biogenesis protein MshI2.
  
     0.705
gspN
T2aSS secretion system protein GspN.
  
     0.702
seqA
Negative regulator of DNA replication SeqA; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated.
  
     0.670
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.