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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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from curated databases
textmining
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
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[Homology]
Score
SO_3759Diguanylate cyclase with GAF sensory domain. (324 aa)    
Predicted Functional Partners:
barA
Histidine kinase; Two component signal transduction system hybrid histidine kinase/response regulator with DUF2222 and Hpt domains BarA.
  
 0.977
SO_0859
Histidine kinase; Two component signal transduction system hybrid histidine kinase/response regulator with PAS sensory domain.
 
 0.975
SO_2539
Two component signal transduction system response regulator with cyclic diguanylate phosphodiesterase activity and PAS sensory domain.
  
 0.970
SO_1255
Bifunctional diguanylate cyclase/phosphodiesterase.
  
 0.969
SO_4145
Signalling protein with EAL and C2 domains.
  
 0.964
SO_2498
Bifunctional diguanylate cyclase/phosphodiesterase with GAF and PAS sensory domains.
  
 0.963
SO_3821
Diguanylate phosphodiesterase.
 
   
 0.956
SO_4552
Bifunctional diguanylate cyclase with PAS sensory domain/signalling protein with EAL domain.
 
0.951
SO_0628
Bifunctional diguanylate cyclase/phosphodiesterase.
  
0.947
SO_2216
Bifunctional diguanylate cyclase with GAF and PAS sensory domains/signalling protein with EAL domain.
 
0.936
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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