STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydDABC-type cysteine/glutathione export system bifunctional ATPase and permease components CydD. (646 aa)    
Predicted Functional Partners:
cydC
ABC-type cysteine/glutathione export system bifunctional ATPase and permease component CydC.
 
0.999
cydB
Cytochrome d ubiquinol oxidase subunit II CydB.
 
  
 0.993
cydA
Cytochrome d ubiquinol oxidase subunit I CydA.
  
 0.986
ybgT
Protein YbgT.
  
  
 0.906
pstB
ABC-type high affinity phosphate uptake system ATPase component PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.899
cyaB
Cytoplasmic adenylate cyclase CyaB.
       0.689
ccoG
Cbb3-type cytochrome oxidase assembly protein CcoG.
     
 0.673
senC
Cytochrome c oxidase biogenesis protein SenC.
   
  
 0.510
cysA2
ABC-type sulfate/thiosulfate uptakesystem ATPase component CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
     
0.508
ccoS
Cbb3-type cytochrome oxidase assembly protein CcoS.
     
 0.482
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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