Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SO_3560 | SO_3848 | SO_3560 | SO_3848 | Predicted non-catalytic member of peptidase subfamily M16B. | Cytoplasmic protein of unknown function. | 0.920 |
SO_3560 | rseP | SO_3560 | SO_1636 | Predicted non-catalytic member of peptidase subfamily M16B. | RseA degrading zinc metalloprotease RseP. | 0.931 |
SO_3770 | SO_3848 | SO_3770 | SO_3848 | Phosphate transport accessory protein of unknown function DUF47. | Cytoplasmic protein of unknown function. | 0.443 |
SO_3770 | ybfE | SO_3770 | SO_2331 | Phosphate transport accessory protein of unknown function DUF47. | Ribbon-helix-helix protein repressor CopG family YbfE. | 0.608 |
SO_3847 | SO_3848 | SO_3847 | SO_3848 | Cell wall assembly/cell proliferation coordinating protein KNR4-like protein. | Cytoplasmic protein of unknown function. | 0.634 |
SO_3848 | SO_3560 | SO_3848 | SO_3560 | Cytoplasmic protein of unknown function. | Predicted non-catalytic member of peptidase subfamily M16B. | 0.920 |
SO_3848 | SO_3770 | SO_3848 | SO_3770 | Cytoplasmic protein of unknown function. | Phosphate transport accessory protein of unknown function DUF47. | 0.443 |
SO_3848 | SO_3847 | SO_3848 | SO_3847 | Cytoplasmic protein of unknown function. | Cell wall assembly/cell proliferation coordinating protein KNR4-like protein. | 0.634 |
SO_3848 | SO_4022 | SO_3848 | SO_4022 | Cytoplasmic protein of unknown function. | Periplasmic peptidase family M16B. | 0.920 |
SO_3848 | rseP | SO_3848 | SO_1636 | Cytoplasmic protein of unknown function. | RseA degrading zinc metalloprotease RseP. | 0.903 |
SO_3848 | ybfE | SO_3848 | SO_2331 | Cytoplasmic protein of unknown function. | Ribbon-helix-helix protein repressor CopG family YbfE. | 0.701 |
SO_4022 | SO_3848 | SO_4022 | SO_3848 | Periplasmic peptidase family M16B. | Cytoplasmic protein of unknown function. | 0.920 |
SO_4022 | rseP | SO_4022 | SO_1636 | Periplasmic peptidase family M16B. | RseA degrading zinc metalloprotease RseP. | 0.926 |
rseP | SO_3560 | SO_1636 | SO_3560 | RseA degrading zinc metalloprotease RseP. | Predicted non-catalytic member of peptidase subfamily M16B. | 0.931 |
rseP | SO_3848 | SO_1636 | SO_3848 | RseA degrading zinc metalloprotease RseP. | Cytoplasmic protein of unknown function. | 0.903 |
rseP | SO_4022 | SO_1636 | SO_4022 | RseA degrading zinc metalloprotease RseP. | Periplasmic peptidase family M16B. | 0.926 |
ybfE | SO_3770 | SO_2331 | SO_3770 | Ribbon-helix-helix protein repressor CopG family YbfE. | Phosphate transport accessory protein of unknown function DUF47. | 0.608 |
ybfE | SO_3848 | SO_2331 | SO_3848 | Ribbon-helix-helix protein repressor CopG family YbfE. | Cytoplasmic protein of unknown function. | 0.701 |