STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SO_3871Thiol:disulfide interchange protein DsbA family. (203 aa)    
Predicted Functional Partners:
dsbI
Disulfide bond formation protein DsbB family; Required for disulfide bond formation in some proteins. Part of a redox system composed of DsbI and DsbL that mediates formation of an essential disulfide bond in AssT (By similarity).
 
  
 0.926
assT
Arylsulfate sulfotransferase AssT.
 
   
 0.684
SO_3060
Outer membrane porin.
  
    0.636
sirB
Sulfurtransferase SirB.
  
    0.613
SO_0312
Outer membrane porin.
  
    0.594
gsk
Inosine-guanosine kinase Gsk.
 
     0.571
SO_0787
Uncharacterized protein.
   
    0.511
SO_3718
Thiol:disulfide interchange protein DsbA family.
 
   
 0.476
grxA
Glutaredoxin GrxA.
  
   
 0.473
SO_0039
Globin.
  
  
 0.459
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.