STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpdACyclic 3', 5'-adenosine monophosphate phosphodiesterase CpdA; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. (278 aa)    
Predicted Functional Partners:
cyaC
Adenylate cyclase CyaC.
      
 0.964
SO_3900
Enzyme of unknown function UPF0227.
  
 0.957
nudF
ADP-ribose pyrophosphatase NudF.
    
 0.947
SO_3442
Nucleoside triphosphate pyrophosphohydrolase.
  
  
  0.924
nagD
Haloacid dehalogenase subfamily IIA associated with N-acetylglucosamine degradation NagD.
 
  
  0.913
purB
Adenylosuccinate lyase PurB; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.907
ushA
Bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA; Belongs to the 5'-nucleotidase family.
   
 
 0.905
SO_3317
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
   
 
 0.905
cyaA
Adenylate cyclase CyaA; Belongs to the adenylyl cyclase class-1 family.
  
   
 0.905
SO_1550
Putative lysine decarboxylase with DUF3412 domain.
    
  0.903
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
Server load: low (32%) [HD]