STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheXChemotaxis signal transduction system CheY dephosphorylase CheX. (154 aa)    
Predicted Functional Partners:
cheY-4
Chemotaxis signal transduction system response regulator CheY.
   
 0.953
SO_0549
Two component signal transduction system response regulator.
 
  
  0.914
cheY
Chemotaxis signal transduction system response regulator CheY.
   
 
  0.905
cheY-2
Chemotaxis signal transduction system response regulator CheY.
   
 
  0.904
cheV
Chemotaxis signal transduction system response regulator CheV.
  
 
 0.810
cheV-2
Chemotaxis signal transduction system response regulator CheV.
   
 
 0.809
cheV-3
Chemotaxis signal transduction system response regulator CheV.
   
 
 0.808
cheC-2
Chemotaxis signal transduction system inhibitor of MCP methylation CheC.
 
  
 0.799
cheC
Chemotaxis signal transduction system inhibitor of MCP methylation CheC.
 
  
 0.764
cheA-2
Chemotaxis signal transduction system histidine kinase CheA.
  
 
 0.753
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.