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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mlaFABC-type phospholipid uptake (salvage) system ATPase component MlaF. (272 aa)    
Predicted Functional Partners:
mlaD
ABC-type phospholipid uptake (salvage) system substrate-binding component MlaD.
 
 0.999
mlaE
ABC-type phospholipid uptake (salvage) system permease component MlaE.
 0.999
mlaC
ABC-type phospholipid uptake (salvage) system periplasmic chaperone MlaC.
 
 
 0.971
mlaB
ABC-type phospholipid uptake (salvage) system anti-anti-sigma factor MlaB.
  
 0.965
sapD
ABC-type peptide uptake system ATPase component 1 SapD; Belongs to the ABC transporter superfamily.
 
    
0.904
sapF
ABC-type peptide uptake system ATPase component 2 SapF.
 
    
0.868
SO_2118
Chemotaxis locus anti-sigma factor antagonist.
   
   0.853
SO_2319
Chemotaxis locus antisigma factor antogonist.
   
   0.853
modB
ABC-type molybdate uptake system permease component ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.780
yrbA
Transcriptional regulator BolA family YrbA; Belongs to the BolA/IbaG family.
  
  
 0.639
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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