Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
narQNitrate/nitrite-responsive two component signal transduction system histidine kinase NarQ. (598 aa)    
Predicted Functional Partners:
narP
Nitrate/nitrite-responsive two component signal transduction system response regulator NarP.
 0.999
nrfA
Ammonia-forming nitrite reductase NrfA; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process. Has very low activity toward hydroxylamine. Has even lower activity toward sulfite. Sulfite reductase activity is maximal at neutral pH (By similarity); Belongs to the cytochrome c-552 family.
     
 0.815
nnrS
Heme-copper-containing inner membrane protein NnrS.
 
   
 0.777
rcsB
Two-component system, NarL family, captular synthesis response regulator RcsB; Two component signal transduction system response regulator of capsule flagella and curli biosynthesis RcsB.
 
 
 0.745
SO_0352
Two component signal transduction system histidine kinase.
  
     0.729
uvrY
Two component signal transduction system response regulator UvrY.
 
 
 0.719
SO_0351
Two component signal transduction system response regulator LuxR family.
 
 
 0.701
SO_1250
SCP-2 sterol transfer family protein.
 
    0.701
SO_3305
Two component signal transduction system response regulator LuxR family.
 
 
 0.698
fnr
Oxygen-responsive transcriptional regulator of anaerobiosis response Fnr; Regulates anaerobic growth on fumarate, nitrite, Fe(3+), TMAO, DMSO, thiosulfate and sulfite, but not on nitrate nor Mn(4+).
 
  
 0.684
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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