STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
narPNitrate/nitrite-responsive two component signal transduction system response regulator NarP. (209 aa)    
Predicted Functional Partners:
narQ
Nitrate/nitrite-responsive two component signal transduction system histidine kinase NarQ.
 0.999
barA
Histidine kinase; Two component signal transduction system hybrid histidine kinase/response regulator with DUF2222 and Hpt domains BarA.
  
 
 0.935
SO_4002
Two component signal transduction system hybrid histidine kinase/response regulator with PAS sensory domain.
  
 
 0.934
SO_0352
Two component signal transduction system histidine kinase.
 
 
 0.919
SO_0859
Histidine kinase; Two component signal transduction system hybrid histidine kinase/response regulator with PAS sensory domain.
   
 
 0.871
nrfA
Ammonia-forming nitrite reductase NrfA; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process. Has very low activity toward hydroxylamine. Has even lower activity toward sulfite. Sulfite reductase activity is maximal at neutral pH (By similarity); Belongs to the cytochrome c-552 family.
     
 0.839
torS
Histidine kinase; TMAO-responsive two component signal transduction system hybrid histidine kinase/response regulator TorS.
  
 
 0.835
crp
cAMP-responsive regulator of catabolite repression Crp.
   
 
 0.788
csgD
Transcriptional activator of curli operon CsgD.
  
     0.755
SO_2725
Transcriptional regulator LuxR family.
  
     0.752
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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