STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tonB-2TonB mediated energy transduction system energy transducer component TonB. (369 aa)    
Predicted Functional Partners:
exbB
TonB2 energy transduction system inner membrane component ExbB.
 
 
 0.958
exbD
TonB2 energy transduction system membrane anchored component ExbD.
 
 
 0.937
exbD-2
TonB1 energy transduction system for heme uptake inner membrane component ExbD.
  
 
 0.919
exbB-2
TonB1 energy transduction system for heme uptake inner membrane component ExbB.
  
 
 0.904
ttpC
TonB2 energy transduction system inner membrane component TtpC.
 
 
 0.891
SO_1824
TonB2 energy transduction system periplasmic component.
 
  
 0.788
SO_1829
Putative Zn-dependent protease associated with TonB2 energy transduction system.
 
    0.766
tolR
TolA energy-transducing system inner membrane component TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.707
putB
Ferric putrebactin reductase PutB.
   
  
 0.703
SO_1376
Integral membrane protein of unknown function DUF1449.
   
    0.701
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.