Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mshGMSHA biogenesis protein MshG. (406 aa)    
Predicted Functional Partners:
mshE
MSHA pilus assembly ATPase MshE.
 
 
 0.998
mshL
MSHA system outer membrane secretin MshL.
 
  
 0.993
gspE
T2aSS secretion system assembly ATPase GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.933
pilB
Type IV pilus assembly ATPase PilB.
 
 0.933
mshI1
MSHA biogenesis protein MshI1.
 
 
 0.917
mshA
MSHA major pilin subunit MshA.
 
  
 0.912
mshJ
MSHA biogenesis protein MshJ.
 
  
 0.907
mshI2
MSHA biogenesis protein MshI2.
 
 
 
 0.897
mshB
MSHA minor pilin protein MshB.
 
  
 0.891
mshH
Signalling protein with GGDEF and EAL domains MshH.
     
 0.889
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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