Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ttrRTwo-component system, LuxR family, response regulator TtrR; Thiosulfate/tetrathionate-responsive two component signal transduction system response regulator TtrR. (202 aa)    
Predicted Functional Partners:
ttrS
Thiosulfate/tetrathionate-responsive two component signal transduction system histidine kinase TtrS.
 0.999
SO_1417
Two component signal transduction system histidine kinase.
 
 
 0.978
SO_1416
Two component signal transduction system response regulator LuxR family.
  
 
 
0.911
ccmB
ABC-type heme export system permease component 1 CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.
   
  
 0.906
cheR-3
Chemotaxis signal transduction system MCP methyltransferase CheR.
      0.872
SO_0490
Transmembrane transcriptional regulator CadC family.
   
  
 0.780
SO_4623
Two component signal transduction system response regulator.
  
   
 0.719
SO_3627
Transcriptional repressor of flavocytochrome c TetR family.
   
  
 0.671
SO_0859
Histidine kinase; Two component signal transduction system hybrid histidine kinase/response regulator with PAS sensory domain.
 
 
 
 0.665
SO_3874
Transcriptional regulator LysR family; Belongs to the LysR transcriptional regulatory family.
      
 0.663
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.