STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hutGFormimidoylglutamase HutG; Belongs to the arginase family. (350 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase HutI; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
 
 0.991
gdh
Glutamate dehydrogenase (NAD+) Gdh.
    
 0.959
putA-2
Bifunctional proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 
 0.934
glnA
Glutamine synthetase GlnA.
    
 0.911
hutH
Histidine ammonia-lyase HutH; Belongs to the PAL/histidase family.
  
  
 0.908
gcvT
Aminomethyltransferase GcvT; The glycine cleavage system catalyzes the degradation of glycine.
  
  
 0.873
panC
Pantoate--beta-alanine ligase PanC; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
     
 0.863
argG
Argininosuccinate synthase ArgG; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 
 0.849
iaaA
Bifunctional isoaspartyl dipeptidase / l-asparaginase IaaA.
  
 
 0.842
puuA
Gamma-glutamyl-putrescine synthase PuuA; Belongs to the glutamine synthetase family.
    
 0.824
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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