Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| dnrN | hcp | SO_4302 | SO_1363 | Repair of iron centers (RIC) protein DnrN; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Hydroxylamine reductase Hcp; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | 0.676 |
| dnrN | hcr | SO_4302 | SO_1364 | Repair of iron centers (RIC) protein DnrN; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | NADH oxidoreductase Hcr. | 0.888 |
| dnrN | iscR | SO_4302 | SO_2263 | Repair of iron centers (RIC) protein DnrN; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Transcriptional repressor of iron-sulfur cluster assembly genes IscR; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins. | 0.604 |
| dnrN | narQ | SO_4302 | SO_3981 | Repair of iron centers (RIC) protein DnrN; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Nitrate/nitrite-responsive two component signal transduction system histidine kinase NarQ. | 0.598 |
| dnrN | nnrS | SO_4302 | SO_2805 | Repair of iron centers (RIC) protein DnrN; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Heme-copper-containing inner membrane protein NnrS. | 0.865 |
| dnrN | nosD | SO_4302 | SO_0486 | Repair of iron centers (RIC) protein DnrN; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | ABC-type copper transport system substrate-binding component NosD. | 0.640 |
| dnrN | nsrR | SO_4302 | SO_0045 | Repair of iron centers (RIC) protein DnrN; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Nitrite-sensitive transcriptional repressor NsrR. | 0.804 |
| dnrN | phsA | SO_4302 | SO_4062 | Repair of iron centers (RIC) protein DnrN; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Sulfur reductase molybdoperterin-binding subunit PhsA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.714 |
| dnrN | phyS | SO_4302 | SO_2524 | Repair of iron centers (RIC) protein DnrN; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Beta-propeller phytase PhyS. | 0.608 |
| dnrN | ygbA | SO_4302 | SO_0324 | Repair of iron centers (RIC) protein DnrN; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | Nitrosative stress induced protein YgbA. | 0.897 |
| hcp | dnrN | SO_1363 | SO_4302 | Hydroxylamine reductase Hcp; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | Repair of iron centers (RIC) protein DnrN; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.676 |
| hcp | hcr | SO_1363 | SO_1364 | Hydroxylamine reductase Hcp; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | NADH oxidoreductase Hcr. | 0.971 |
| hcp | iscR | SO_1363 | SO_2263 | Hydroxylamine reductase Hcp; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | Transcriptional repressor of iron-sulfur cluster assembly genes IscR; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins. | 0.438 |
| hcp | narQ | SO_1363 | SO_3981 | Hydroxylamine reductase Hcp; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | Nitrate/nitrite-responsive two component signal transduction system histidine kinase NarQ. | 0.487 |
| hcp | nnrS | SO_1363 | SO_2805 | Hydroxylamine reductase Hcp; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | Heme-copper-containing inner membrane protein NnrS. | 0.542 |
| hcp | nsrR | SO_1363 | SO_0045 | Hydroxylamine reductase Hcp; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | Nitrite-sensitive transcriptional repressor NsrR. | 0.470 |
| hcp | phsA | SO_1363 | SO_4062 | Hydroxylamine reductase Hcp; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | Sulfur reductase molybdoperterin-binding subunit PhsA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.480 |
| hcp | ygbA | SO_1363 | SO_0324 | Hydroxylamine reductase Hcp; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | Nitrosative stress induced protein YgbA. | 0.448 |
| hcr | dnrN | SO_1364 | SO_4302 | NADH oxidoreductase Hcr. | Repair of iron centers (RIC) protein DnrN; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. | 0.888 |
| hcr | hcp | SO_1364 | SO_1363 | NADH oxidoreductase Hcr. | Hydroxylamine reductase Hcp; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. | 0.971 |
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