close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SO_4303ATPase family protein associated with various cellular activities. (167 aa)    
Predicted Functional Partners:
hsdR
Type I restriction-modification system restriction endonuclease cleavage subunit HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
  
 0.723
hsdS
Type I restriction-modification system restriction endonuclease DNA specificity subunit HsdS.
 
    0.668
hsdS-3
Type I restriction-modification system restriction endonuclease DNA specificity subunit HsdS.
  
    0.616
SO_0768
NAD dependent epimerase/dehydratase family protein.
   
    0.590
dnrN
Repair of iron centers (RIC) protein DnrN; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
       0.527
SO_2585
Uncharacterized protein.
   
    0.516
dmsF
Extracellular dimethyl sulfoxide/manganese oxide reductase outer membrane translocase DmsF.
   
    0.415
mtrB
Extracellular iron oxide respiratory system outer membrane component MtrB.
   
    0.411
SO_0120
Outer membrane porin.
   
    0.410
mtrE
Extracellular respiratory sytem outer membrane component MtrE.
   
    0.410
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.