STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnLNitrogen-responsive two component signal transduction system histidine kinase with PAS sensory domain GlnL. (348 aa)    
Predicted Functional Partners:
glnG
DNA-binding transcriptional regulator NtrC; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.
 0.997
glnB
Regulatory protein for nitrogen assimilation by glutamine synthetase GlnB.
  
 0.971
SO_0760
Ammonium transporter channel family protein.
 
 
 0.877
SO_0547
Putative outer membrane protein TIGR02001 family.
   
    0.793
glnK
Regulatory protein for nitrogen assimilation GlnK; Belongs to the P(II) protein family.
  
 
 0.789
glnK-2
Regulatory protein for nitrogen assimilation GlnK; Belongs to the P(II) protein family.
  
 
 0.761
phoB
Phosphate-responsive two component signal transduction system response regulator PhoB.
  
 
 0.687
SO_3196
Two component signal transduction system response regulator.
 
 
 0.674
SO_4718
Tungstate-responsive two component Sigma54-dependent signal transduction system response regulator Fis family.
 
 0.671
dctD
Two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD; C4-dicarboxylate-responsive two component Sigma54-dependent signal transduction system response regulator DctD.
 
 0.660
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.