Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SO_0551 | SO_2045 | SO_0551 | SO_2045 | Uncharacterized protein. | Cation efflux protein CDF family. | 0.530 |
SO_0551 | fieF | SO_0551 | SO_4475 | Uncharacterized protein. | Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.436 |
SO_2045 | SO_0551 | SO_2045 | SO_0551 | Cation efflux protein CDF family. | Uncharacterized protein. | 0.530 |
SO_2045 | fieF | SO_2045 | SO_4475 | Cation efflux protein CDF family. | Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.540 |
SO_3984 | fieF | SO_3984 | SO_4475 | Metal ion transporter MIT family. | Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.933 |
cpxA | cpxP | SO_4478 | SO_4476 | Periplasmic stress-responsive two component signal transduction system histidine kinase CpxA. | Periplasmic stress adaptor protein CpxP. | 0.720 |
cpxA | fieF | SO_4478 | SO_4475 | Periplasmic stress-responsive two component signal transduction system histidine kinase CpxA. | Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.446 |
cpxP | cpxA | SO_4476 | SO_4478 | Periplasmic stress adaptor protein CpxP. | Periplasmic stress-responsive two component signal transduction system histidine kinase CpxA. | 0.720 |
cpxP | fieF | SO_4476 | SO_4475 | Periplasmic stress adaptor protein CpxP. | Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.651 |
feoB | fieF | SO_1784 | SO_4475 | Ferrous iron transport protein B FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | 0.642 |
fieF | SO_0551 | SO_4475 | SO_0551 | Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Uncharacterized protein. | 0.436 |
fieF | SO_2045 | SO_4475 | SO_2045 | Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Cation efflux protein CDF family. | 0.540 |
fieF | SO_3984 | SO_4475 | SO_3984 | Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Metal ion transporter MIT family. | 0.933 |
fieF | cpxA | SO_4475 | SO_4478 | Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Periplasmic stress-responsive two component signal transduction system histidine kinase CpxA. | 0.446 |
fieF | cpxP | SO_4475 | SO_4476 | Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Periplasmic stress adaptor protein CpxP. | 0.651 |
fieF | feoB | SO_4475 | SO_1784 | Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Ferrous iron transport protein B FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.642 |
fieF | fldA | SO_4475 | SO_2330 | Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Flavodoxin FldA; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family. | 0.783 |
fieF | mdh | SO_4475 | SO_0770 | Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | NAD dependent malate dehydrogenase Mdh; Catalyzes the reversible oxidation of malate to oxaloacetate. | 0.813 |
fieF | sdhA | SO_4475 | SO_1928 | Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | Succinate dehydrogenase flavoprotein subunit SdhA; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.480 |
fieF | tadA | SO_4475 | SO_3291 | Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. | tRNA-specific adenosine deaminase TadA; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. | 0.729 |
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