STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpxPPeriplasmic stress adaptor protein CpxP. (163 aa)    
Predicted Functional Partners:
htpX
Zn-dependent metalloprotease HtpX; Belongs to the peptidase M48B family.
  
  
 0.825
nlpE
Outer membrane lipoprotein NlpE.
  
   
 0.822
ilvM
Acetolactate synthase II small subunit IlvM.
  
     0.744
priB
Primosomal replication protein N PriB; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.
  
     0.724
cpxA
Periplasmic stress-responsive two component signal transduction system histidine kinase CpxA.
  
  
 0.720
gsk
Inosine-guanosine kinase Gsk.
  
     0.708
fieF
Cadmium and zinc efflux pump FieF; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
     
 0.651
SO_1175
Protein of unknown function DUF1451.
  
     0.645
ybfE
Ribbon-helix-helix protein repressor CopG family YbfE.
  
     0.622
pspA
PspF antagonist PspA.
   
  
 0.581
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.