STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SO_4502Molydopterin cofactor biosynthesis protein. (301 aa)    
Predicted Functional Partners:
fdhD-2
Formate dehydrogenase assembly/maturation protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
    0.910
SO_4506
Iron-sulfur cluster-binding protein.
 
    0.837
SO_4505
Formate dehydrogenase associated protein of unknown function DUF3506.
 
     0.832
fdhT
Formate dehydrogenase chaperone FdhT.
 
    0.824
tupB
ABC-type tungstate uptake system permease component TupB.
 
    0.814
fdhC
Formate dehydrogenase cytochrome b subunit FdhC.
 
    0.805
fdhA-2
Fnr-inducilble formate dehydrogenase molybdopterin-binding subunit FdhA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.805
fdhA
Formate dehydrogenase molybdopterin-binding subunit FdhA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
    0.801
tupA
ABC-type tungstate uptake system substrate-binding component TupA.
 
     0.792
fdhC-2
Fnr-inducible formate dehydrogenase cytochrome b subunit FdhC.
 
     0.773
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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