STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
fdhA-2Fnr-inducilble formate dehydrogenase molybdopterin-binding subunit FdhA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (950 aa)    
Predicted Functional Partners:
fdhC-2
Fnr-inducible formate dehydrogenase cytochrome b subunit FdhC.
 
 
 0.999
fdhC
Formate dehydrogenase cytochrome b subunit FdhC.
 
 
 0.998
fdhB-2
Fnr-inducible formate dehydrogenase FeS subunit FdhB.
 
 
 0.996
SO_4506
Iron-sulfur cluster-binding protein.
 
 
 0.992
fdhB
Formate dehydrogenase FeS subunit FdhB.
 
 
 0.992
SO_0988
Molybdopterin-binding oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
0.983
fdnI
Nitrate-inducible formate dehydrogenase cytochrome b subunit FdnI.
 
 
 0.974
fdnH
Nitrate-inducible formate dehydrogenase iron-sulfur subunit FdnH; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.
  
 
 0.958
fdh
Formate dehydrogenase cytochrome b Fdh.
  
 
  0.950
fdhA
Formate dehydrogenase molybdopterin-binding subunit FdhA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
0.932
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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